rule mafft:
    input: 
        "fusionFasta/allSequences.fasta",
    output:
        "mafft/mafft_res.fasta",
    shell:
        """
            mafft {input} > {output} 
        """


rule loadData:
    output: 
         "fasta/P01325.fasta", "fasta/P01308.fasta",
    params:
        dirFasta = "fasta",
    shell:
        """
          wget --directory-prefix {params.dirFasta} https://www.uniprot.org/uniprot/P01325.fasta
          wget --directory-prefix {params.dirFasta} https://www.uniprot.org/uniprot/P01308.fasta
        """


rule fusionFasta:
    input:
        p1="fasta/P01325.fasta", 
        p2="fasta/P01308.fasta",
    output:
        "fusionFasta/allSequences.fasta",
    shell:
        """
            cat {input.p1} {input.p2} > {output}
        """